Plant Genomics Databases

Methods and Protocols

Paperback Engels 2018 9781493982639
Verwachte levertijd ongeveer 9 werkdagen

Samenvatting

This volume introduces databases containing the results from the recent revolution in sequencing technologies. Chapters in Plant Genomics Databases: Methods and Protocols describe database content, as well as typical use-cases. Some chapters explore databases that primarily present genome sequences focusing on one or a few related species, while others include additional datatypes and/or data from various plant species. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, step-by-step, readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls.

Cutting-edge and comprehensive, Plant Genomics Databases: Methods and Protocols is a valuable resource for providing clear guidance in accessing an important collection of plant databases that can be used to add biological value to genomic data.

Specificaties

ISBN13:9781493982639
Taal:Engels
Bindwijze:paperback
Uitgever:Springer New York

Lezersrecensies

Wees de eerste die een lezersrecensie schrijft!

Inhoudsopgave

<p>Ensembl Plants: Integrating Tools for Visualizing, Mining and Analyzing Plant Genomics Data.-&nbsp;PGSB/MIPS PlantsDB Database Framework for the Integration and Analysis of Plant Genome Data.-&nbsp;Plant Genome DataBase Japan (PGDBj).-&nbsp;FLAGdb++: A Bioinformatic Environment to Study and Compare Plant Genomes.-&nbsp;Mining Plant Genomic and Genetic Data Using the GnpIS Information System.-&nbsp;The Bio-Analytic Resource for Plant Biology.-&nbsp;The Evolution of Soybean Knowledge Base (SoyKB).-&nbsp;Using TropGeneDB: a Database Containing Data on Molecular Markers, QTLs, Maps, Genotypes, and Phenotypes for Tropical Crops.-&nbsp;Species-Specific Genome Sequence Databases: A Practical Review.- A&nbsp;Guide to the PLAZA 3.0 Plant Comparative Genomics Database.-&nbsp;Exploring Plant Co-Expression and Gene-Gene Interactions with CORNET 3.0.-&nbsp;PlaNet: Comparative Co-Expression Network Analyses for Plants.-&nbsp;Practical Utilization of OryzaExpress and Plant Omics Data Center Databases to Explore Gene Expression Networks in Oryza sativa and Other Plant Species.-&nbsp;Pathway Analysis and Omics Data Visualization using Pathway Genome Databases: FragariaCyc, A Case Study.-&nbsp;CSGRqtl: A Comparative Quantitative Trait Locus Database for Saccharinae Grasses.-&nbsp;Plant Genome Duplication Database.-&nbsp;Variant Effect Prediction Analysis using Resources Available at Gramene Database.-&nbsp;Plant Promoter Database.-&nbsp;Construction of the Leaf Senescence Database and Functional Assessment of Senescence-Associated Genes.</p>

Managementboek Top 100

Rubrieken

    Personen

      Trefwoorden

        Plant Genomics Databases